LOGICOIL: multi-state prediction of coiled-coil oligomeric state.


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Documentation for package ‘LOGICOIL’ version 0.99.0

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LOGICOIL-package Predict oligomerization state of coiled-coil sequences.
EstimateProbability Estimate oligomeric state score at each position of the input coiled-coil sequence
LOGICOIL Predict oligomerization state of coiled-coil sequences.
LOGICOILfit Fit of the multinomial log-linear model obtained from the LOGICOIL training dataset.
Model_Parameters Model parameters for the LOGICOIL prediction algorithm.
plot_LOGICOIL Plot the LOGICOIL scores
pssm Profile scoring matrix derived from the LOGICOIL training set.