Systematic Quantification of AgNPs to Unleash their Potential for Applicability

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Documentation for package ‘sysAgNPs’ version 1.0.0

• DESCRIPTION file.

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binary_dataset	A binary dataframe of datasets used to establish evaluation criteria.
dataset	Nanosilver data set.
sysAgNPs_score	sysAgNPs package application results in four evaluation scores.
sys_CalculateAxisPath	Calculate Axis Path This function is derived from the 'ggradar' package. <URL: https://github.com/ricardo-bion/ggradar/>. Calculates x-y coordinates for a set of radial axes (one per variable being plotted in radar plot)
sys_CalculateGroupPath	Calculate Group Path This function is derived from the 'ggradar' package. <URL: https://github.com/ricardo-bion/ggradar/>. Converts variable values into a set of radial x-y coordinates
sys_CE	Calculate the Combination Entropy
sys_DE	Calculate the Distribution Entropy
sys_discretize	Convert categorical variables into discrete variables
sys_eval_cri	Build Transition Scores criteria
sys_funcCircleCoords	Generate circle coordinates This function is derived from the 'ggradar' package. <URL: https://github.com/ricardo-bion/ggradar/>. Generate coordinates to draw a circle.
sys_generate_color_values	Generate Dynamic Color Values This function is derived from the 'ggradar' package. <URL: https://github.com/ricardo-bion/ggradar/>. This function dynamically generates a vector of color values based on the number of groups. It uses RColorBrewer for smaller sets of groups and generates a gradient for larger sets.
sys_ggradar	This function is derived from the 'ggradar' package. <URL: https://github.com/ricardo-bion/ggradar/>.
sys_iter	Obtain the transition probability of each iteration
sys_line_radar	Line and Radar Plot of sysAgNPs score
sys_PE	Calculate the Proclivity Entropy
sys_steady	Iterate to obtain the steady state probability
sys_tran	Calculate transition probability matrix
sys_TS	Calculate the Transition Scores
tran_matrix	A transfer probability matrix.