Power Analysis for Differential Expression Studies
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Documentation for package ‘depower’ version 2025.1.20
Help Pages
| glmm_bnb | GLMM for BNB ratio of means |
| glmm_poisson | GLMM for Poisson ratio of means |
| glm_nb | GLM for NB ratio of means |
| lrt_bnb | Likelihood ratio test for BNB ratio of means |
| lrt_nb | Likelihood ratio test for NB ratio of means |
| mle_bnb | MLE for BNB |
| mle_bnb_alt | MLE for BNB |
| mle_bnb_null | MLE for BNB |
| mle_nb | MLE for NB |
| mle_nb_alt | MLE for NB |
| mle_nb_null | MLE for NB |
| nll_bnb | Negative log-likelihood for BNB |
| nll_bnb_alt | Negative log-likelihood for BNB |
| nll_bnb_null | Negative log-likelihood for BNB |
| nll_nb | Negative log-likelihood for NB |
| nll_nb_alt | Negative log-likelihood for NB |
| nll_nb_null | Negative log-likelihood for NB |
| plot.depower | Plot power objects |
| power | Simulated power |
| sim_bnb | Simulate data from a BNB distribution |
| sim_log_lognormal | Simulate data from a normal distribution |
| sim_nb | Simulate data from a NB distribution |
| t_test_paired | Paired and one-sample t-Tests |
| t_test_welch | Welch's t-Test |
| wald_test_bnb | Wald test for BNB ratio of means |
| wald_test_nb | Wald test for NB ratio of means |