Product-limit estimation. Kaplan-Meier and Aalen-Johansson
method for censored event history (survival) analysis
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Documentation for package ‘prodlim’ version 1.4.5
Help Pages
| atRisk | Drawing numbers of subjects at-risk of experiencing an event below Kaplan-Meier and Aalen-Johannsen plots. |
| backGround | Background and grid color control. |
| clusterTestData | Data set with a clustered data structure, for testing the product limit method. |
| confInt | Add point-wise confidence limits to the graphs of Kaplan-Meier and Aalen-Johannsen estimates of survival and cumulative incidence. |
| crModel | Competing risks model for simulation |
| dimColor | Dim a given color to a specified density |
| EventHistory.frame | Event history frame |
| getEvent | Extract a column from an event history object. |
| getStates | States of a multi-state model |
| Hist | Create an event history response variable |
| jackknife | Compute jackknife pseudo values. |
| jackknife.competing.risks | Compute jackknife pseudo values. |
| jackknife.survival | Compute jackknife pseudo values. |
| leaveOneOut | Compute jackknife pseudo values. |
| leaveOneOut.competing.risks | Compute jackknife pseudo values. |
| leaveOneOut.survival | Compute jackknife pseudo values. |
| lines.prodlim | Plotting event probabilities over time |
| markTime | Marking product-limit plots at the censored times. |
| meanNeighbors | Helper function to obtain running means for prodlim objects. |
| model.design | Extract a design matrix and specials from a model.frame |
| neighborhood | Nearest neighborhoods for kernel smoothing |
| NN | Dummy function |
| parseSpecialNames | Parse special terms |
| PercentAxis | Percentage-labeled axis. |
| plot.Hist | Box-arrow diagrams for multi-state models. |
| plot.prodlim | Plotting event probabilities over time |
| plotCompetingRiskModel | Plotting a competing-risk-model. |
| plotIllnessDeathModel | Plotting an illness-death-model. |
| predict.prodlim | Predicting event probabilities from product limit estimates |
| predictCuminc | Predicting event probabilities from product limit estimates |
| predictSurv | Predicting event probabilities from product limit estimates |
| predictSurvIndividual | Predict individual survival probabilities |
| print.Hist | Print objects in the prodlim library |
| print.neighborhood | Print objects in the prodlim library |
| print.prodlim | Print objects in the prodlim library |
| prodlim | product limit method |
| quantile.prodlim | Quantiles for Kaplan-Meier and Aalen-Johansen estimates. |
| row.match | Identifying rows in a matrix or data.frame |
| SimCompRisk | Simulate competing risks data |
| SimSurv | Simulate survival data |
| sindex | Index for evaluation of step functions. |
| SmartControl | Function to facilitate the control of arguments passed to subroutines. |
| summary.Hist | Summary of event histories |
| summary.prodlim | Summary method for prodlim objects. |
| survModel | Survival model for simulation |