PCRedux-package |
PCRedux - quantitative PCR Data Mining and Machine Learning Toolkit |
armor |
armor: fetch errors gently |
autocorrelation_test |
A function to test for autocorrelation of amplification curve data from a quantitative PCR experiment |
data_sample |
The datasets implemented in PCRedux |
decision_modus |
A function to get a decision (modus) from a vector of classes |
decision_res_kbqPCR |
The datasets implemented in PCRedux |
earlyreg |
A function to calculate the slope and intercept of an amplification curve data from a quantitative PCR experiment. |
encu |
A function to calculate numerous features from amplification curve data from a quantitative PCR experiment. |
head2tailratio |
A function to calculate to head to tail ratio of amplification curve data from a quantitative PCR experiment |
hookreg |
A function to calculate the slope and intercept of an amplification curve data from a quantitative PCR experiment at the end of the data stream. |
hookregNL |
hookregNL - A function to calculate the slope of amplification curves in the tail region |
humanrater2 |
Human Rater 2.0 |
kbqPCR |
The datasets implemented in PCRedux |
l4 |
PCRedux - quantitative PCR Data Mining and Machine Learning Toolkit |
mblrr |
A function to perform a Local Robust Regression in Ranges defined by Qunantile-filtering |
PCRedux |
PCRedux - quantitative PCR Data Mining and Machine Learning Toolkit |
pcrfit_single |
pcrfit_single - A function to extract features from an amplification curve |
performeR |
Performance analysis for binary classification |
qPCR2fdata |
A helper function to convert amplification curve data to the fdata format. |
RAS002 |
The datasets implemented in PCRedux |
RAS002_decisions |
The datasets implemented in PCRedux |
run_PCRedux |
PCRedux app |
tReem |
A function to Group Amplification Curves According to their Shape |
winklR |
winklR: A function to calculate the angle based on the first and the second derivative of an amplification curve data from a quantitative PCR experiment. |