Metabolomics Univariate and Multivariate Analysis

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Documentation for package ‘muma’ version 1.4

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muma-package Metabolomics Univariate and Multivariate Analyses
box.plot Generate box plots
chose.driver List variables in the dataset
col.pvalues Color-coding based on significance
explore.data Preprocessing and principal component analysis of metabolomic data
MetaBc Metabolomics data of B cells
muma Metabolomics Univariate and Multivariate Analyses
oplsda Orthogonal Partial Least Sqaure Discriminant Analysis
ostocsy OSC Statistical TOtal Correlation SpectroscopY
outlier Test for Outlier
Plot.pca principal component analysis plotting
Plot.pca.loading Plot PCA Loading Plot
Plot.pca.pvalues PCA Loading plot color-coded for univariate significance
Plot.pca.score Plot PCA Score Plot
Plot.plsda PLS plots
plsda Partial Least Square Discriminant Analysis
pvalues P-values reporting
ransy Ratio Analysis NMR SpectroscopY
shapiro Shapiro Wilk's test
stocsy Statistical TOtal Correlation SpectroscopY
stocsy.1d Statistical TOtal Correlation SpectroscopY - monodimensional
univariate Univariate statistical analysis
volcano Volcano plots
welch Welch's T test
wmw Wilcoxon-Mann Whitney U test
work.dir Create a working directory