Class prediction based on microarray data and clinical parameters


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Documentation for package ‘MAclinical’ version 1.0-5

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generate.learningsets Generating learning sets
logistic_z Class prediction based on logistic regression using clinical parameters only
plsrf_x Classification based on PLS dimension reduction and random forests using microarray data only
plsrf_xz Classification based on PLS dimension reduction and random forests using both clinical and microarray predictors
plsrf_xz_pv Classification based on pre-validated PLS dimension reduction and random forests using both clinical and microarray predictors
plsrf_x_pv Classification based on pre-validated PLS dimension reduction and random forests using microarray data only
rf_z Class prediction based on random forests using clinical parameters only
simuldatacluster_list Simulating data
simuldata_list Simulating data
svm_x Classification based on support vector machines using microarray data only
testclass Evaluating a classification method based on several learning subsets
testclass_simul Evaluating a classification method based on simulated data