PSIMEX-package |
SIMEX Algorithm on Pedigree Structures |
data |
Trait data |
extrapolation |
Extrapolation phase for the SIMEX algorithm on pedigrees |
fit.nls |
Fitting a non linear function on the data |
initial |
Calculation of the initial error prone value for inbreeding depression |
initial_herit |
Calculation of the initial error prone value for heritability |
pedigree |
Pedigree data |
plot.Psimex |
A plot illustrating the extrapolation phase of the P-SIMEX algorithm |
plot.simul.Psimex |
A plot illustrating the simulation phase of the P-SIMEX algorithm |
PSIMEX |
SIMEX Algorithm on Pedigree Structures |
Psimex |
Pedigree SIMEX |
simul.na |
Simulation phase for the P-SIMEX with missing paternities. |
simul.na.bottom |
Simulation phase for P-SIMEX on inbreeding depression with missing paternities and errors in the last generations of the pedigree. |
simul.na.bottom.herit |
Simulation phase for P-SIMEX on heritability with missing paternities and errors in the last generations of the pedigree. |
simul.na.top |
Simulation phase for P-SIMEX on inbreeding depression with missing paternities and errors in the first generations of the pedigree. |
simul.na.top.herit |
Simulation phase for P-SIMEX on heritability with missing paternities and errors in the first generations of the pedigree. |
simul.na.uni |
Simulation phase for P-SIMEX on inbreeding depression with missing paternities and uniform errors. |
simul.na.uni.herit |
Simulation phase for P-SIMEX on heritability with missing paternities and uniform errors. |
simul.replace |
Simulation phase for the P-SIMEX with misassignment error. |
simul.replace.similar |
Simulation phase for P-SIMEX on inbreeding depression with misassignment error and replacement with similar individuals. |
simul.replace.similar.herit |
Simulation phase for P-SIMEX on heritability with misassignment error and replacement with similar individuals. |
simul.replace.uni |
Simulation phase for P-SIMEX on inbreeding depression with misassignment error and uniform replacement. |
simul.replace.uni.herit |
Simulation phase for P-SIMEX on heritability with misassignment error and uniform replacement. |