Tools to Read and Manipulate Fisheries Data

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Documentation for package ‘RstoxData’ version 1.1.1

• DESCRIPTION file.
• Package NEWS.

Help Pages

RstoxData-package	Tools to Read and Manipulate Fisheries Data
AcousticData	StoX data type AcousticData
AddToStoxBiotic	Add variables to StoxBioticData from BioticData
backwardCompatibility	Backward compabitibility actions:
BioticData	StoX data type BioticData
ConvertAcoustic	Convert AcousticData
ConvertBiotic	Convert BioticData
ConvertStoxAcoustic	Convert StoxAcousticData
ConvertStoxBiotic	Convert StoxBioticData
DataTypes	StoX data types of the RstoxData package
DefineTranslation	Define translation
FilterAcoustic	Filter (raw) Acoustic data
FilterBiotic	Filter (raw) Biotic data
filterData	Run filter on any StoX related data source
FilterLanding	Filter LandingData
FilterStoxAcoustic	Filter StoxAcoustic data
FilterStoxBiotic	Filter StoxBiotic data
FilterStoxLanding	Filter StoxLanding data
general_arguments	General parameters of RstoxData.
getRstoxDataDefinitions	Get RstoxData definitions
getStoxKeys	Get the keys of a StoX format
ICESAcoustic	Converts 'AcousticData' to 'ICESAcousticData'
ICESAcousticData	StoX data type ICESAcousticData
ICESBiotic	Write ICES biotic CSV format file
ICESBioticData	StoX data type ICESBioticData
ICESDatras	Write ICES DATRAS (NS-IBTS) format file
ICESDatrasData	StoX data type ICESDatrasData
is.LandingData	Check if argument is LandingData
is.StoxLandingData	Check if argument is StoxLandingData
LandingData	LandingData
lapplyOnCores	Run a function on all elements of x on one or more cores
mapplyOnCores	Run a function on all elements of x on one or more cores
mergeByIntersect	Merge two data tables by the intersect of the names
mergeByStoxKeys	Merge two data tables by StoX keys
mergeDataTables	Merge list of data tables recursively
MergeStoxAcoustic	Merge StoxAcousticData
MergeStoxAcousticData	StoX data type MergeStoxAcousticData
MergeStoxBiotic	Merge StoxBioticData
MergeStoxBioticData	StoX data type MergeStoxBioticData
ModelData	StoX data types of the RstoxData package
parseInterCatch	Parses InterCatch
ProcessData	Process data used in estimation models in StoX
processPropertyFormats	Define the process property formats:
ReadAcoustic	Read acoustic XML files
ReadBiotic	Read biotic XML files
readErsFile	Parses logbooks (ERS)
ReadLanding	Read landing XML files
readLssFile	Parses landings (sales notes)
readXmlFile	Read fisheries XML data format file
RedefineStoxBiotic	Redefine StoxBioticData variables by data from BioticData
ReportICESAcoustic	Reports 'ICESAcousticData' to a csv file for each input acoustic file used to create the 'ICESAcousticData'
ReportICESAcousticData	Rbind 'ICESAcousticData' to a string matrix.
ReportICESBiotic	Reports 'ICESBioticData' to a csv file for each input acoustic file used to create the 'ICESBioticData'
ReportICESBioticData	Rbind 'ICESBioticData' to a string matrix.
ReportICESDatras	Reports 'ICESDatrasData' to a csv file for each input acoustic file used to create the 'ICESDatras'
ReportICESDatrasData	Rbind 'ICESDatrasData' to a string matrix.
RstoxData	Tools to Read and Manipulate Fisheries Data
setorderv_numeric	Order a data.table (by reference) by interpreting characters as numeric if possible
setRstoxPrecisionLevel	Round off to number of digits
StoxAcoustic	Convert AcousticData to StoxAcousticData
StoxAcousticData	StoX data type StoxAcousticData
StoxBiotic	Convert BioticData to StoxBioticData
StoxBioticData	StoX data type StoxBioticData
stoxBioticObject	stoxBioticObject
stoxFunctionAttributes	Function specification for inclusion in StoX projects
StoxLanding	Convert landing data
StoxLandingData	StoxLandingData
TranslateAcoustic	Translate AcousticData
TranslateBiotic	Translate BioticData
TranslateLanding	Translate LandingData
TranslateStoxAcoustic	Translate StoxAcousticData
TranslateStoxBiotic	Translate StoxBioticData
TranslateStoxLanding	Translate StoxLandingData
Translation	Translation definition (from file or from table).
xsdObjects	xsdObjects