Convex Biclustering Algorithm


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Documentation for package ‘cvxbiclustr’ version 0.0.1

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biclust_smooth Bicluster Smooth
cobra Convex Biclustering Algorithm
cobra_internal Convex Biclustering via Dykstra-like Proximal Algorithm
cobra_pod MM algorithm for Convex Biclustering with Missing Data
cobra_validate Perform validation to select regularization parameter
compactify_edges Construct indices matrices
convert Convert weights, as COO matrix, to CSC matrix and weights vector
create_adjacency Create adjacency matrix from V
create_edge_incidence Edge-Incidence Matrix of Weights Graph
find_clusters Find clusters
get_subgroup_means Get Subgroup Means
get_subgroup_means_full Get Subgroup Means
get_validation Select Validation Set for a Matrix
gkn_weights Gaussian Kernel + k-Nearest Neighbor Weights
kernel_weights Compute Gaussian Kernel Weights
knn_weights "Thin" a weight vector to be positive only for its k-nearest neighbors
lung Lung cancer data
weights_graph Weights Graph Adjacency Matrix