glmBfp-package |
Bayesian inference for fractional polynomial models from the GLM and Cox family |
as.data.frame.GlmBayesMfp |
Convert a GlmBayesMfp object into a data frame |
bfp |
Mark a covariate for transformation with fractional polynomials |
computeModels |
Compute model information for a given list of model configurations and glmBayesMfp output. |
convert2Mcmc |
Convert samples to mcmc objects |
coxTBF |
Fit Cox models using glmBayesMfp |
CustomGPrior |
Constructor for the custom g-prior class |
CustomGPrior-class |
The custom g-prior class |
empiricalHpd |
Construct an empirical HPD interval from samples |
Extract.GlmBayesMfp |
Extract method for GlmBayesMfp objects |
fpTrans |
Transform formula variables |
GlmBayesMfp |
Bayesian model inference for fractional polynomial GLMs and Cox models |
glmBayesMfp |
Bayesian model inference for fractional polynomial GLMs and Cox models |
GlmBayesMfpSamples-subsetting |
Subset method for GlmBayesMfpSamples objects |
glmBfp |
Bayesian inference for fractional polynomial models from the GLM and Cox family |
HypergPrior |
Constructor for the hyper-g prior class |
HypergPrior-class |
The hyper-g prior class |
IncInvGammaGPrior |
Constructor for the incomplete inverse gamma g-prior class |
IncInvGammaGPrior-class |
The incomplete inverse gamma g-prior class |
inclusionProbs |
Compute posterior inclusion probabilites based on GlmBayesMfp object |
InvGammaGPrior |
Constructor for the inverse gamma g-prior class |
InvGammaGPrior-class |
The inverse gamma g-prior class |
logMargLiks |
Extract the log marginal likelihood estimates from a GlmBayesMfp object |
logPriors |
Extract the log prior values from a GlmBayesMfp object |
McmcOptions |
Constructor for class McmcOptions |
plotCurveEstimate |
Function for plotting a fractional polynomial curve estimate |
posteriors |
Extract posterior model probability estimates from a GlmBayesMfp object |
predict.TBFcox |
Prediction methods for CoxTBF objects |
predict.TBFcox.BMA |
Prediction methods for CoxTBF objects for BMA models |
predict.TBFcox.sep |
Prediction methods for CoxTBF objects with separate estimates |
print.GlmBayesMfp |
Print a GlmBayesMfp object. |
sampleBma |
Produce posterior samples from a Bayesian model average over GLMs / Cox models |
sampleGlm |
Produce posterior samples from one GLM / Cox model |
sampleSize |
Compute the number of samples for a given MCMC options triple |
scrHpd |
Calculate an SCB from a samples matrix |
uc |
Mark a covariate for transformation with fractional polynomials |
[-method |
Subset method for GlmBayesMfpSamples objects |
[.GlmBayesMfp |
Extract method for GlmBayesMfp objects |