Maximum likelihood tree models for oncogenesis


[Up] [Top]

Documentation for package ‘oncomodel’ version 1.0

Help Pages

oncomodel-package Maximum likelihood tree models for oncogenesis
boot.conf.values Bootstrap Confidence Values
comp.freq Compare Model Probabilities to Frequencies
is.tree Compare with Tree Format
kidney Cytogenetic Data from Kidney Carcinoma
leafset.prob Probability of a Set of Leaves
leafset.prob2 Probability of a Set of Leaves
MLparameters Compute Maximum Likelihood Parameters
MLtopology Compute Maximum Likelihood Tree Topology
mrca Most Recent Common Ancestor
oncomodel Maximum likelihood tree models for oncogenesis
subtree Subtree