Species Sensitivity Distributions


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Documentation for package ‘ssdtools’ version 2.3.0

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A B C D E G I P Q R S T

-- A --

args Parameter Descriptions for ssdtools Functions
arguments Parameter Descriptions for ssdtools Functions
augment.fitdists Augmented Data from fitdists Object
autoplot.fitdists Plot a fitdists Object

-- B --

boron_pred Model Averaged Predictions for CCME Boron Data

-- C --

coef.fitdists Turn a fitdists Object into a Tidy Tibble
comma_signif Comma and Significance Formatter *[Deprecated]*

-- D --

dgompertz Gompertz Probability Density *[Deprecated]*
dist_data Distribution Data
dlgumbel Log-Gumbel (Inverse Weibull) Probability Density *[Deprecated]*

-- E --

estimates.fitdists Estimates for fitdists Object

-- G --

GeomHcintersect ggproto Classes for Plotting Species Sensitivity Data and Distributions
GeomSsdpoint ggproto Classes for Plotting Species Sensitivity Data and Distributions
GeomSsdsegment ggproto Classes for Plotting Species Sensitivity Data and Distributions
GeomXribbon ggproto Classes for Plotting Species Sensitivity Data and Distributions
geom_hcintersect Species Sensitivity Hazard Concentration Intersection
geom_ssd Species Sensitivity Data Points *[Deprecated]*
geom_ssdpoint Species Sensitivity Data Points
geom_ssdsegment Species Sensitivity Censored Segments
geom_xribbon Ribbon on X-Axis
glance.fitdists Get a tibble summarizing each distribution

-- I --

is.fitdists Is fitdists Object
is_censored Is Censored *[Deprecated]*

-- P --

parameters Parameter Descriptions for ssdtools Functions
params Parameter Descriptions for ssdtools Functions
pgompertz Cumulative Distribution Function for Gompertz Distribution *[Deprecated]*
plgumbel Cumulative Distribution Function for Log-Gumbel Distribution *[Deprecated]*
predict.fitburrlioz Predict Hazard Concentrations of fitburrlioz Object
predict.fitdists Predict Hazard Concentrations of fitdists Object

-- Q --

qgompertz Quantile Function for Gompertz Distribution *[Deprecated]*
qlgumbel Quantile Function for Log-Gumbel Distribution *[Deprecated]*

-- R --

rgompertz Random Generation for Gompertz Distribution *[Deprecated]*
rlgumbel Random Generation for log-Gumbel Distribution

-- S --

scale_color_ssd Discrete color-blind scale for SSD Plots
scale_colour_ssd Discrete color-blind scale for SSD Plots
scale_fill_ssd Discrete color-blind scale for SSD Plots
ssdtools-ggproto ggproto Classes for Plotting Species Sensitivity Data and Distributions
ssd_censor_data Censor Data
ssd_data Data from fitdists Object
ssd_dists Species Sensitivity Distributions
ssd_dists_all All Species Sensitivity Distributions
ssd_dists_bcanz BCANZ Distributions
ssd_dists_shiny All Shiny Species Sensitivity Distributions
ssd_e Default Parameter Estimates
ssd_eburrIII3 Default Parameter Estimates
ssd_ecd Empirical Cumulative Density
ssd_ecd_data Empirical Cumulative Density for Species Sensitivity Data
ssd_egamma Default Parameter Estimates
ssd_egompertz Default Parameter Estimates
ssd_einvpareto Default Parameter Estimates
ssd_elgumbel Default Parameter Estimates
ssd_ellogis Default Parameter Estimates
ssd_ellogis_llogis Default Parameter Estimates
ssd_elnorm Default Parameter Estimates
ssd_elnorm_lnorm Default Parameter Estimates
ssd_emulti Default Parameter Estimates
ssd_eweibull Default Parameter Estimates
ssd_exposure Proportion Exposure
ssd_fit_bcanz Fit BCANZ Distributions
ssd_fit_burrlioz Fit Burrlioz Distributions
ssd_fit_dists Fit Distributions
ssd_gof Goodness of Fit
ssd_gof.fitdists Goodness of Fit
ssd_hc Hazard Concentrations for Species Sensitivity Distributions
ssd_hc.fitburrlioz Hazard Concentrations for Species Sensitivity Distributions
ssd_hc.fitdists Hazard Concentrations for Species Sensitivity Distributions
ssd_hc.list Hazard Concentrations for Species Sensitivity Distributions
ssd_hc_bcanz BCANZ Hazard Concentrations
ssd_hc_burrlioz Hazard Concentrations for Burrlioz Fit *[Deprecated]*
ssd_hp Hazard Proportion
ssd_hp.fitburrlioz Hazard Proportion
ssd_hp.fitdists Hazard Proportion
ssd_hp_bcanz BCANZ Hazard Proportion
ssd_is_censored Is Censored
ssd_is_censored.data.frame Is Censored
ssd_is_censored.fitdists Is Censored
ssd_label_comma Label numbers with significant digits and comma
ssd_label_comma_hc Label numbers with significant digits and comma. If 'hc_value' is present in breaks, put on new line and make bold.
ssd_licensing_md Licensing Markdown
ssd_match_moments Match Moments
ssd_min_pmix Calculate Minimum Proportion in Mixture Models
ssd_p Cumulative Distribution Function
ssd_pal Color-blind Palette for SSD Plots
ssd_pburrIII3 Cumulative Distribution Function
ssd_pgamma Cumulative Distribution Function
ssd_pgompertz Cumulative Distribution Function
ssd_pinvpareto Cumulative Distribution Function
ssd_plgumbel Cumulative Distribution Function
ssd_pllogis Cumulative Distribution Function
ssd_pllogis_llogis Cumulative Distribution Function
ssd_plnorm Cumulative Distribution Function
ssd_plnorm_lnorm Cumulative Distribution Function
ssd_plot Plot Species Sensitivity Data and Distributions
ssd_plot_cdf Plot Cumulative Distribution Function (CDF)
ssd_plot_cdf.fitdists Plot Cumulative Distribution Function (CDF)
ssd_plot_cdf.list Plot Cumulative Distribution Function (CDF)
ssd_plot_cf Cullen and Frey Plot *[Deprecated]*
ssd_plot_data Plot Species Sensitivity Data
ssd_pmulti Cumulative Distribution Function
ssd_pmulti_fitdists Cumulative Distribution Function
ssd_pweibull Cumulative Distribution Function
ssd_q Quantile Function
ssd_qburrIII3 Quantile Function
ssd_qgamma Quantile Function
ssd_qgompertz Quantile Function
ssd_qinvpareto Quantile Function
ssd_qlgumbel Quantile Function
ssd_qllogis Quantile Function
ssd_qllogis_llogis Quantile Function
ssd_qlnorm Quantile Function
ssd_qlnorm_lnorm Quantile Function
ssd_qmulti Quantile Function
ssd_qmulti_fitdists Quantile Function
ssd_qweibull Quantile Function
ssd_r Random Number Generation
ssd_rburrIII3 Random Number Generation
ssd_rgamma Random Number Generation
ssd_rgompertz Random Number Generation
ssd_rinvpareto Random Number Generation
ssd_rlgumbel Random Number Generation
ssd_rllogis Random Number Generation
ssd_rllogis_llogis Random Number Generation
ssd_rlnorm Random Number Generation
ssd_rlnorm_lnorm Random Number Generation
ssd_rmulti Random Number Generation
ssd_rmulti_fitdists Random Number Generation
ssd_rweibull Random Number Generation
ssd_sort_data Sort Species Sensitivity Data
ssd_wqg_bc Water Quality Guideline for British Columbia *[Deprecated]*
ssd_wqg_burrlioz Water Quality Guideline for Burrlioz *[Deprecated]*
StatSsdpoint ggproto Classes for Plotting Species Sensitivity Data and Distributions
StatSsdsegment ggproto Classes for Plotting Species Sensitivity Data and Distributions
stat_ssd Plot Species Sensitivity Data *[Deprecated]*
subset.fitdists Subset fitdists Object

-- T --

tidy.fitdists Turn a fitdists Object into a Tibble