| BaySIC-package |
Bayesian Analysis of Significantly Mutated Genes in Cancer |
| BaySIC |
Bayesian Analysis of Significantly Mutated Genes in Cancer |
| baysic.data |
Organizes data for BaySIC functions |
| baysic.fit |
Fits BaySIC BMR model |
| baysic.test |
BaySIC Evaluation of SMGs |
| BMR.plot |
Visualize Sequence Context BMRs |
| ccds.18 |
CCDS Reference Data (Build hg18) |
| ccds.19 |
CCDS Reference Data (Build hg19) |
| example.dat |
Example Mutation Data (Build hg19) |
| fn.cat |
Collapses SNV and reference data into sequence mutation categories |
| fuzzy.FDR.approx |
Generate Approximate Fuzzy Rejection Probabilites |
| revcomp |
DNA Reverse Complementation |
| write.baysic |
Write BaySIC JAGS model files |
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