Programs for Analyzing Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry Data

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Documentation for package ‘FTICRMS’ version 0.8

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FTICRMS-package Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry (FT-ICR MS) Analysis
baseline Calculate Baselines for Spectroscopic Data
display.tests Display Full Test Information for Peaks
extract.pars Extract Parameters from File
FTICRMS Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry (FT-ICR MS) Analysis
locate.peaks Locate Peaks in a FT-ICR MS Spectrum
make.par.file Create Parameter File for FT-ICR MS Analysis
run.all Complete Analysis of FT-ICR MS Data
run.analysis Test for Significant Peaks in FT-ICR MS by Controlling FDR
run.baselines Calculate and Store Baselines for Spectroscopic Data
run.cluster.matrix Identify Equivalent Peaks from Different Subjects
run.lrg.peaks Extract "Large" Peaks from Files
run.peaks Locate Potential Peaks in FT-ICR MS Spectra
run.strong.peaks Locate Peaks that are "Large" in All Samples