Network Comparison Based on Structural Equivalence and Graphlets


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Documentation for package ‘NetworkSim’ version 0.1.0

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ADE2CAR.DEGs DEGs of the adenoma-carcinoma transition
ADE2CAR.net PPI network of ADE2CAR.DEGs
databases.net integrated PPI network
netGDD Calculate the Graphlet degree distribution (GDD) agreement between two networks
netSE Calculate the structural equivalence between two networks
nodesCom Get the common nodes from two networks
NOR2ADE.DEGs DEGs between colonic normals and adenomas
NOR2ADE.net PPI network of NOR2ADE.DEGs
subnet Subnetwork from a network