A reporting pipeline for checking population pharmacokinetic model assumption


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Documentation for package ‘PKreport’ version 1.5

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PKreport-package An automatically pipeline for population pharmacokinetic models
initialize-method Class nonmem: contain and describe all nonmem output
non.coi Class nonmem: contain and describe all nonmem output
non.coi-method Output coi file
non.coi-method Class nonmem: contain and describe all nonmem output
non.coi-methods Output coi file
non.cor Class nonmem: contain and describe all nonmem output
non.cor-method Output cor file
non.cor-method Class nonmem: contain and describe all nonmem output
non.cor-methods Output cor file
non.cov Class nonmem: contain and describe all nonmem output
non.cov-method Output cov file
non.cov-method Class nonmem: contain and describe all nonmem output
non.cov-methods Output cov file
non.lst Class nonmem: contain and describe all nonmem output
non.lst-method Output lst content
non.lst-method Class nonmem: contain and describe all nonmem output
non.lst-methods Output lst content
non.lst.meth Class nonmem: contain and describe all nonmem output
non.lst.meth-method output method in lst file
non.lst.meth-method Class nonmem: contain and describe all nonmem output
non.lst.meth-methods output method in lst file
non.lst.objs Class nonmem: contain and describe all nonmem output
non.lst.objs-method Output objective function standard deviation in lst file
non.lst.objs-method Class nonmem: contain and describe all nonmem output
non.lst.objs-methods Output objective function standard deviation in lst file
non.lst.objt Class nonmem: contain and describe all nonmem output
non.lst.objt-method Output objective function in lst file
non.lst.objt-method Class nonmem: contain and describe all nonmem output
non.lst.objt-methods Output objective function in lst file
non.lst.objv Class nonmem: contain and describe all nonmem output
non.lst.objv-method Output objective function value in lst file
non.lst.objv-method Class nonmem: contain and describe all nonmem output
non.lst.objv-methods Output objective function value in lst file
non.lst.term Class nonmem: contain and describe all nonmem output
non.lst.term-method output analysis section in lst file
non.lst.term-methods output analysis section in lst file
non.phi Class nonmem: contain and describe all nonmem output
non.phi-method Output phi file
non.phi-method Class nonmem: contain and describe all nonmem output
non.phi-methods Output phi file
non.select Class nonmem: contain and describe all nonmem output
non.select-method Output selected lines in lst files
non.select-method Class nonmem: contain and describe all nonmem output
non.select-methods Output selected lines in lst files
non.tab Class nonmem: contain and describe all nonmem output
non.tab-method Output tab content in tab file
non.tab-method Class nonmem: contain and describe all nonmem output
non.tab-methods Output tab content in tab file
non.term-method Class nonmem: contain and describe all nonmem output
nonmem-class Class nonmem: contain and describe all nonmem output
pdata A sample data
PKadjust Update figures
PKclean Clean related archives
PKcode Generate R scripts
PKconfig Data configuration
PKdata Data input
PKfigure Diagnose model and generate figures
PKnum Output numerical value
PKoutput Output all results to folders and files
PKreport An automatically pipeline for population pharmacokinetic models
PKreport.1 Exploratory data analysis
PKreport.2 Individual plots
PKreport.3 Goodness-of-fit plots
PKreport.4 Structural model diagnostics
PKreport.5 Residual model diagnostics
PKreport.6 Parameters diagnostics
PKreport.7 Covariate model diagnostics
PKreport.8 Random effects diagnostics
PKshow Display results