Terrestrial Point Cloud Processing of Forest Data


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Documentation for package ‘TreeLS’ version 2.0.2

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add_segmentIDs Plot _TreeLS_ outputs
add_stemPoints Plot _TreeLS_ outputs
add_stemSegments Plot _TreeLS_ outputs
add_tlsInventory Plot _TreeLS_ outputs
add_treeIDs Plot _TreeLS_ outputs
add_treeMap Plot _TreeLS_ outputs
add_treePoints Plot _TreeLS_ outputs
circleFit Point cloud circle fit
cylinderFit Point cloud cylinder fit
fastPointMetrics Calculate point neighborhood metrics
fastPointMetrics.available Print available point metrics
gpsTimeFilter Filter points based on the 'gpstime' field
map.eigen.knn Tree mapping algorithm: KNN point geometry
map.eigen.voxel Tree mapping algorithm: Voxel geometry
map.hough Tree mapping algorithm: Hough Transform
map.pick Tree mapping algorithm: pick trees manually
nnFilter Nearest neighborhood point filter
ptm.knn Point metrics algorithm: K Nearest Neighbors metrics
ptm.voxel Point metrics algorithm: Voxel metrics
readTLS Import a point cloud file into a LAS object
setTLS (Re-)Create a 'LAS' object depending on the input's type
sgt.bf.cylinder Stem segmentation algorithm: Brute Force cylinder fit
sgt.irls.circle Stem segmentation algorithm: Iterated Reweighted Least Squares circle fit
sgt.irls.cylinder Stem segmentation algorithm: Iterated Reweighted Least Squares cylinder fit
sgt.ransac.circle Stem segmentation algorithm: RANSAC circle fit
sgt.ransac.cylinder Stem segmentation algorithm: RANSAC cylinder fit
shapeFit Point cloud cylinder/circle fit
shapeFit.forks EXPERIMENTAL: Point cloud multiple circle fit
smp.randomize Point sampling algorithm: random sample
smp.voxelize Point sampling algorithm: systematic voxel grid
stemPoints Stem points classification
stemSegmentation Stem segmentation
stm.eigen.knn Stem denoising algorithm: KNN eigen decomposition + point normals intersections voting
stm.eigen.voxel Stem denoising algorithm: Voxel eigen decomposition + point normals intersections voting
stm.hough Stem denoising algorithm: Hough Transform
tlsCrop Point cloud cropping
tlsInventory Extract forest inventory metrics from a point cloud
tlsNormalize Normalize a TLS point cloud
tlsPlot Plot _TreeLS_ outputs
tlsRotate Rotate point cloud to fit a horizontal ground plane
tlsSample Resample a point cloud
tlsTransform Simple operations on point cloud objects
treeMap Map tree occurrences from TLS data
treeMap.merge Merge tree coordinates too close on 'treeMap' outputs.
treeMap.positions Convert a tree map to a 2D 'data.table'
treePoints Classify individual tree regions in a point cloud
trp.crop Tree points algorithm: fixed size patches.
trp.voronoi Tree points algorithm: voronoi polygons.
writeTLS Export _TreeLS_ point clouds to las/laz files