allBiodiversity |
Calculates all Biodiversity indicators |
allPotential |
Calculates all Resource Potential indicators |
allPressure |
Calculates all Pressure indicators |
allStability |
Calculates all Stability and Resistance indicators |
allStructure |
Calculates all Structure and Functioning indicators |
biomassPerTL |
Calculates the biomass per discrete trophic level |
biomassRatio |
Calculates the biomass ratio between two species groups |
communityCondition |
Calculates Fulton's Condition Index for the community |
CVBiomass |
Calculates the Coefficient of Variation of the Biomass |
example_inds |
Indicators calculated from the example data included in the package |
extractAll |
Calculates indicators from all attributes |
fishingInBalance |
Calculates the Fishing-in-Balance Index |
fishingPressure |
Calculates Fishing Pressure |
heips |
Calculates Heip's Evenness Index |
hillN1 |
Calculates Hill's Index of Diversity (N1) |
hillN2 |
Calculates Hill's Species Dominance (N2) |
IVILandings |
Calculates the Intrinsic Vulnerability Index of commercial landings |
kemptonQ |
Calculates Kempton's Biodiversity Index |
land |
Example commercial landings data |
landings |
Calculates the Landings per fished group |
largeFishIndicator |
Calculates the Large Fish Indicator |
largeSpeciesIndicator |
Calculates the Large Species Indicator |
Length_Weight |
Example length-weight data |
margalef |
Calculates Margalef's Species Richness |
meanLengthCommunity |
Calculates the Mean Length of the Community weighted by biomass or abundance |
meanMaxAge |
Calculates the Mean Maximum Age of fish in the community |
meanMaxLength |
Calculates the Mean Maximum Length of fish in the community |
meanTLCommunity |
Calculates the Mean Trophic Level of the community |
meanTLLandings |
Calculates the Mean Trophic Level or Marine Trophic Index of fisheries landings |
pielouEvenness |
Calculates Pielou's Species Evenness |
resourcePotential |
Calculates the Resource Potential of species groups |
shannon |
Calculates Shannon's Index of Diversity |
species.info |
Species information |
species.table |
Example input for argument species.table |
speciesRichness |
Calculates Species Richness of the community or the Diversity of Target Species |
X |
Example fishery independent survey data |
X_length |
Example length-based fishery independent survey data |