Paleoecological Analysis

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Documentation for package ‘paleoMAS’ version 2.0-1

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paleoMAS-package Paleoecological Analysis
akaike.all LOESS regression parameters selection through AIC minimization for multiple taxa
akaike.l Loess regression parameters selection through AIC minimization for one taxon
analog.mult Multiple analogs comparison
analog.sing Single analog comparison
bcrossv.all LOESS regression parameters selection through bootstrap cross-validation for multiple taxa
bcrossv.l LOESS regression parameters selection through bootstrap cross-validation for one taxon
bcrossv.l1 LOESS regression bootstrap cross-validation with fixed parameters
bcrossv.sa Bootstrap cross-validation of synthetic assemblages fossil estimates
change Dissimilarities, distances and rates of change
chron Age-depth computation
dispersion.all Taxon response to environmental variables through LOESS regression
error.l LOESS regression error estimation for multiple taxa
filter.p Filter for Presence and Persistence
fossil.dist Distance calculation between fossil samples and modern synthetic assemblages
fossil.values Fossil environmental parameters calculation
fossilq Pollen percentages Aluik Pond
modernq Pollen counts Northern Quebec Treeline
paleoMAS Paleoecological Analysis
percenta Computation of percentage matrix
quexilchron Chronology Lake Quexil
quexildepths Depths Lake Quexil
quexilper Pollen percentages Lake Quexil
run.mean Moving averages
simulat Sample simulation
simulat.t Model desaturation by samples simulation
syas Synthetic assemblages
synthetic Calculation of synthetic assemblages
vcrossv.all V-fold iterative cross-validation for discriminant analysis
vcrossv.da V-fold cross-validation for discriminant analysis