o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t > Member List

This is the complete list of members for o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >, including all inherited members.

ac_coeffs(size_t ncols, ubmatrix &ac_coeffs)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual
ac_lengths(size_t ncols, ubmatrix &ac_coeffs_cols, ubvector &ac_lengths)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual
add_line(const vec_t &pars, double log_weight, size_t walker_ix, int func_ret, bool mcmc_accept, data_t &dat, size_t i_thread, fill_t &fill)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual
aff_invo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
ai_initial_stepo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
always_accepto2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
best_point(vec_t &best, double w_best, data_t &dat)o2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >inlineprotectedvirtual
cl_argso2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >
col_nameso2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
col_unitso2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
curr_walkero2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
currento2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
data_arro2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
err_nonconvo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
file_header(o2scl_hdf::hdf_file &hf)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >inlineprotectedvirtual
file_update_iterso2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >
file_update_timeo2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >
fill_line(const vec_t &pars, double log_weight, std::vector< double > &line, data_t &dat, size_t i_walker, fill_t &fill)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlineprotectedvirtual
first_writeo2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
get_chain_sizes(std::vector< size_t > &chain_sizes)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inline
get_table()o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inline
high_copyo2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
initial_pointso2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
initial_points_file_best(std::string fname, size_t n_param_loc, double thresh=1.0e-6, size_t offset=5)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual
initial_points_file_dist(std::string fname, size_t n_param_loc, size_t offset=5)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual
initial_points_file_last(std::string fname, size_t n_param_loc, size_t offset=5)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual
internal_measure_t typedefo2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
last_write_iterso2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
last_write_timeo2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
low_copyo2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
max_bad_stepso2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
max_iterso2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
max_timeo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
mcmc(size_t n_params_local, vec_t &low, vec_t &high, std::vector< func_t > &func, std::vector< fill_t > &fill)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual
mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >::mcmc(size_t n_params, vec_t &low, vec_t &high, std::vector< func_t > &func, std::vector< std::function< int(const vec_t &, double, size_t, int, bool, data_t &)> > &meas)o2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >inlinevirtual
mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >::mcmc(size_t n_params, vec_t &low, vec_t &high, func_t &func, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)> &meas)o2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >inlinevirtual
mcmc_cleanup()o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual
mcmc_doneo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >static
mcmc_init()o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlineprotectedvirtual
mcmc_para_old_base() (defined in o2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >)o2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >inline
mcmc_para_old_table() (defined in o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inline
mcmc_skipo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >static
meas_for_initialo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
mpi_ranko2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
mpi_sizeo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
mpi_start_timeo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
n_accepto2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
n_chains_per_ranko2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
n_paramso2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
n_rejecto2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
n_threadso2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
n_walko2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
n_walk_per_threado2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
n_warm_upo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
p_aff_inv (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_file_update_iters (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_file_update_time (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_max_bad_steps (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_max_iters (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_max_time (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_n_walk (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_n_warm_up (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_prefix (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_step_fac (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_store_rejects (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_table_sequence (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_user_seed (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
p_verbose (defined in o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
parent_t typedefo2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >protected
pd_modeo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
post_pointmeas()o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual
prefixo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
prev_reado2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
prop_disto2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
read_prev_results(o2scl_hdf::hdf_file &hf, size_t n_param_loc, std::string name="")o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual
reblock(size_t n_blocks)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inline
reorder_table()o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual
ret_value_countso2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
rgo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
scr_outo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
set_names_units(std::vector< std::string > names, std::vector< std::string > units)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual
set_proposal(prob_vec_t &pv)o2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >inline
set_proposal_ptrs(prob_vec_t &pv)o2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >inline
set_table(std::shared_ptr< o2scl::table_units<> > &t)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inline
setup_cli(cli &cl)o2scl::mcmc_para_old_cli< func_t, fill_t, data_t, vec_t >inlinevirtual
step_faco2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
store_rejectso2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >
switch_arro2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
tableo2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
table_io_chunko2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >
table_sequenceo2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >
unset_proposal()o2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >inlinevirtual
user_seedo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
verboseo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >
walker_accept_rowso2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
walker_reject_rowso2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >protected
warm_upo2scl::mcmc_para_old_base< func_t, std::function< int(const vec_t &, double, size_t, int, bool, data_t &)>, data_t, vec_t >protected
write_files(bool sync_write=false)o2scl::mcmc_para_old_table< func_t, fill_t, data_t, vec_t >inlinevirtual

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