Class Bio::Fasta::Report::Program
In: lib/bio/appl/fasta/format10.rb
Parent: Object

Log of the fasta execution environments.

Methods

new  

Attributes

definition  [R]  Returns a String containing query and library filenames.
program  [R]  Accessor for a Hash containing ‘mp_name’, ‘mp_ver’, ‘mp_argv’, ‘pg_name’, ‘pg_ver, ‘pg_matrix’, ‘pg_gap-pen’, ‘pg_ktup’, ‘pg_optcut’, ‘pg_cgap’, ‘mp_extrap’, ‘mp_stats’, and ‘mp_KS’ values.

Public Class methods

[Source]

    # File lib/bio/appl/fasta/format10.rb, line 87
87:     def initialize(data)
88:       @definition, *program = data.split(/\n/)
89:       @program = {}
90: 
91:       pat = /;\s+([^:]+):\s+(.*)/
92: 
93:       program.each do |x|
94:         if pat.match(x)
95:           @program[$1] = $2
96:         end
97:       end
98:     end

[Validate]