Package org.ujmp.core.treematrix
Class AbstractTreeMatrix<T>
- java.lang.Object
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- java.lang.Number
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- org.ujmp.core.AbstractMatrix
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- org.ujmp.core.genericmatrix.stub.AbstractGenericMatrix<T>
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- org.ujmp.core.numbermatrix.stub.AbstractNumberMatrix<java.lang.Double>
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- org.ujmp.core.doublematrix.stub.AbstractDoubleMatrix
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- org.ujmp.core.doublematrix.stub.AbstractDoubleMatrix2D
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- org.ujmp.core.doublematrix.stub.AbstractSparseDoubleMatrix2D
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- org.ujmp.core.treematrix.AbstractTreeMatrix<T>
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- All Implemented Interfaces:
java.io.Serializable
,java.lang.Cloneable
,java.lang.Comparable<Matrix>
,javax.swing.tree.TreeModel
,HasMetaData
,BaseMatrix
,BooleanCalculations
,CanPerformCalculations
,DenseMatrix
,DenseMatrix2D
,DenseMatrixMultiD
,BaseDoubleMatrix
,BasicDoubleCalculations
,DoubleCalculations
,BasicEntrywiseDoubleCalculations
,CreatorDoubleCalculations
,EntrywiseDoubleCalculations
,HyperbolicDoubleCalculations
,MiscEntrywiseDoubleCalculations
,RoundingDoubleCalculations
,TrigonometricDoubleCalculations
,DecompositionDoubleCalculations
,DiscretizeCalculations
,GeneralDoubleCalculations
,MiscGeneralDoubleCalculations
,MissingValueDoubleCalculations
,StatisticalDoubleCalculations
,DenseDoubleMatrix
,DenseDoubleMatrix2D
,DenseDoubleMatrixMultiD
,DoubleMatrix
,DoubleMatrix2D
,DoubleMatrixMultiD
,SparseDoubleMatrix
,SparseDoubleMatrix2D
,SparseDoubleMatrixMultiD
,BaseGenericMatrix<java.lang.Double>
,DenseGenericMatrix<java.lang.Double>
,DenseGenericMatrix2D<java.lang.Double>
,DenseGenericMatrixMultiD<java.lang.Double>
,GenericMatrix<java.lang.Double>
,GenericMatrix2D<java.lang.Double>
,GenericMatrixMultiD<java.lang.Double>
,SparseGenericMatrix<java.lang.Double>
,SparseGenericMatrix2D<java.lang.Double>
,SparseGenericMatrixMultiD<java.lang.Double>
,BaseMatrixProperties
,Clearable
,Conversions
,CoordinateFunctions
,CoreObject
,DistanceMeasures
,ExtendedMatrixProperties
,GettersAndSetters
,HasDescription
,HasGUIObject
,HasId
,HasLabel
,IntCalculations
,Matrix
,Matrix2D
,MatrixMultiD
,BaseNumberMatrix<java.lang.Double>
,DenseNumberMatrix<java.lang.Double>
,DenseNumberMatrix2D<java.lang.Double>
,DenseNumberMatrixMultiD<java.lang.Double>
,NumberMatrix<java.lang.Double>
,NumberMatrix2D<java.lang.Double>
,NumberMatrixMultiD<java.lang.Double>
,SparseNumberMatrix<java.lang.Double>
,SparseNumberMatrix2D<java.lang.Double>
,SparseNumberMatrixMultiD<java.lang.Double>
,ObjectCalculations
,SparseMatrix
,SparseMatrix2D
,SparseMatrixMultiD
,StringCalculations
,Tree<T>
,TreeMatrix<T>
- Direct Known Subclasses:
DefaultTreeMatrix
,ObjectTreeMatrix
public abstract class AbstractTreeMatrix<T> extends AbstractSparseDoubleMatrix2D implements TreeMatrix<T>
- See Also:
- Serialized Form
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Field Summary
Fields Modifier and Type Field Description private static long
serialVersionUID
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Fields inherited from class org.ujmp.core.AbstractMatrix
guiObject, size
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Fields inherited from interface org.ujmp.core.BaseMatrix
ALL, COLUMN, LINK, NEW, NONE, ORIG, ROW, X, Y, Z
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Fields inherited from interface org.ujmp.core.DenseMatrix
Factory
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Fields inherited from interface org.ujmp.core.DenseMatrix2D
Factory
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Fields inherited from interface org.ujmp.core.doublematrix.DoubleMatrix
Factory
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Fields inherited from interface org.ujmp.core.doublematrix.DoubleMatrix2D
Factory
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Fields inherited from interface org.ujmp.core.interfaces.HasDescription
DESCRIPTION
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Fields inherited from interface org.ujmp.core.annotation.HasMetaData
DIMENSIONMETADATA
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Fields inherited from interface org.ujmp.core.Matrix
chol, divideMatrix, divideScalar, eig, Factory, inv, lu, minusMatrix, minusScalar, mtimes, plusMatrix, plusScalar, qr, solve, svd, timesMatrix, timesScalar, transpose
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Fields inherited from interface org.ujmp.core.doublematrix.SparseDoubleMatrix2D
Factory
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Fields inherited from interface org.ujmp.core.SparseMatrix
Factory
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Fields inherited from interface org.ujmp.core.SparseMatrix2D
Factory
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Constructor Summary
Constructors Constructor Description AbstractTreeMatrix()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
addChild(T parent, T child)
void
addChildren(T parent, java.util.Collection<? extends T> children)
void
addObject(T o)
void
addTreeModelListener(javax.swing.event.TreeModelListener l)
boolean
containsCoordinates(long... coordinates)
Determines if the given Coordinates are part of the Matrix.T
getChild(java.lang.Object parent, int index)
int
getChildCount(java.lang.Object parent)
long
getChildCountRecursive(java.lang.Object parent)
double
getDouble(int row, int column)
double
getDouble(long row, long column)
int
getIndexOfChild(java.lang.Object parent, java.lang.Object child)
int
getNumberOfObjects()
T
getObject(int index)
T
getParent(java.lang.Object o)
long[]
getSize()
boolean
isChild(int parentId, int childId)
boolean
isChild(java.lang.Object parent, java.lang.Object child)
boolean
isLeaf(java.lang.Object node)
void
removeChild(T parent, T child)
void
removeTreeModelListener(javax.swing.event.TreeModelListener l)
void
setDouble(double value, int row, int column)
void
setDouble(double value, long row, long column)
void
valueForPathChanged(javax.swing.tree.TreePath path, java.lang.Object newValue)
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Methods inherited from class org.ujmp.core.doublematrix.stub.AbstractSparseDoubleMatrix2D
availableCoordinates, getDimensionCount, getObject, getObject, isSparse, setObject, setObject
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Methods inherited from class org.ujmp.core.doublematrix.stub.AbstractDoubleMatrix2D
getDouble, setDouble
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Methods inherited from class org.ujmp.core.doublematrix.stub.AbstractDoubleMatrix
getAsDouble, getNumber, getObject, getValueType, setAsDouble, setNumber, setObject
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Methods inherited from class org.ujmp.core.genericmatrix.stub.AbstractGenericMatrix
getAsObject, setAsObject
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Methods inherited from class org.ujmp.core.AbstractMatrix
abs, addMissing, allCoordinates, allValues, and, and, append, appendHorizontally, appendVertically, atimes, bigDecimalValue, bigIntegerValue, booleanValue, bootstrap, bootstrap, ceil, center, charValue, chebyshevDistanceTo, chol, clone, compareTo, containsBigDecimal, containsBigInteger, containsBoolean, containsByte, containsChar, containsDate, containsDouble, containsFloat, containsInt, containsLong, containsMissingValues, containsNull, containsObject, containsShort, containsString, convert, convertEncoding, corrcoef, cos, cosh, cosineSimilarity, cosineSimilarityTo, countMissing, cov, cumprod, cumsum, dateValue, delete, delete, delete, deleteColumns, deleteColumns, deleteColumnsWithMissingValues, deleteRows, deleteRows, deleteRowsWithMissingValues, det, diag, diff, discretize, discretize, discretizeToBoolean, discretizeToColumns, divide, divide, divide, divide, doubleValue, eig, eigSymm, eq, eq, equals, equalsAnnotation, equalsContent, euklideanDistance, euklideanDistanceTo, exp, exportTo, extractAnnotation, eye, fadeIn, fadeOut, fill, fireValueChanged, fireValueChanged, fireValueChanged, flipdim, floatValue, floor, ge, ge, getAbsoluteValueMean, getAbsoluteValueSum, getAsBigDecimal, getAsBigInteger, getAsBoolean, getAsByte, getAsByteArray, getAsChar, getAsDate, getAsFloat, getAsInt, getAsLong, getAsMatrix, getAsShort, getAsString, getColumnCount, getColumnForLabel, getColumnLabel, getColumnList, getCoordinatesOfMaximum, getCoordinatesOfMinimum, getCoreObjectId, getDescription, getDimensionLabel, getDimensionMetaData, getEuklideanValue, getFactory, getGUIObject, getId, getLabel, getLabelObject, getMaxValue, getMeanValue, getMetaData, getMetaData, getMetaDataDimensionMatrix, getMetaDataDouble, getMetaDataMatrix, getMetaDataString, getMinValue, getPositionForLabel, getPreferredObject, getRMS, getRowCount, getRowForLabel, getRowLabel, getRowList, getSize, getStdValue, getValueCount, getValueSum, getZCount, ginv, grayScale, gt, gt, importFrom, impute, includeAnnotation, indexOfMax, indexOfMin, intValue, inv, invSPD, invSymm, isColumnVector, isDiagonal, isEmpty, isMultidimensionalMatrix, isReadOnly, isResizable, isRowVector, isScalar, isSingular, isSPD, isSquare, isSymmetric, isTransient, le, le, log, log10, log2, logistic, longValue, lowerCase, lt, lt, lu, manhattenDistance, manhattenDistanceTo, max, mean, min, minkowskiDistance, minkowskiDistanceTo, minus, minus, minus, minus, mtimes, mtimes, mutualInf, nans, ne, ne, nonZeroCoordinates, norm1, norm2, normalize, normF, normInf, not, ones, or, or, pairedTTest, pdet, pinv, pinv, plus, plus, plus, plus, power, power, princomp, prod, qr, rand, randn, rank, removePunctuation, removeWords, replace, replaceMissingBy, replaceRegex, replaceRegex, reshape, round, save, save, select, select, select, selectColumns, selectColumns, selectedCoordinates, selectedCoordinates, selectRows, selectRows, setAsBigDecimal, setAsBigInteger, setAsBoolean, setAsByte, setAsByteArray, setAsChar, setAsDate, setAsFloat, setAsInt, setAsLong, setAsMatrix, setAsShort, setAsString, setColumnLabel, setContent, setDescription, setDimensionLabel, setDimensionMetaData, setId, setLabel, setMetaData, setMetaData, setMetaDataDimensionMatrix, setRowLabel, setSize, share, share, showGUI, shuffle, sign, sin, sinh, solve, solveSPD, solveSymm, sortrows, sqrt, squeeze, standardize, std, stem, stringValue, subMatrix, sum, svd, svd, swap, tan, tanh, tanh, tfIdf, times, times, times, times, toBigDecimalArray, toBigDecimalMatrix, toBigIntegerArray, toBigIntegerMatrix, toBooleanArray, toBooleanMatrix, toByteArray, toByteMatrix, toCharArray, toCharMatrix, toColumnVector, toDateArray, toDoubleArray, toDoubleMatrix, toFloatArray, toFloatMatrix, toHtml, toIntArray, toIntMatrix, toListMatrix, toLongArray, toLongMatrix, toMapMatrix, toObjectArray, toObjectMatrix, toRowVector, toSetMatrix, toShortArray, toShortMatrix, toString, toStringArray, toStringMatrix, trace, translate, transpose, transpose, transpose, tril, triu, unique, uniqueValueCount, upperCase, var, xor, xor, zeros
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Methods inherited from class java.lang.Object
finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
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Methods inherited from interface org.ujmp.core.BaseMatrix
getFactory
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Methods inherited from interface org.ujmp.core.interfaces.BaseMatrixProperties
allValues, equals, equalsAnnotation, equalsContent, getColumnCount, getColumnList, getDimensionCount, getRowCount, getRowList, getSize, getValueCount, getValueType, getZCount, isColumnVector, isDiagonal, isEmpty, isMultidimensionalMatrix, isReadOnly, isResizable, isRowVector, isScalar, isSingular, isSparse, isSquare, isSymmetric, isTransient, setSize, toString
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.basic.BasicDoubleCalculations
atimes, divide, divide, divide, divide, minus, minus, minus, minus, mtimes, mtimes, plus, plus, plus, plus, times, times, times, times
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.basic.BasicEntrywiseDoubleCalculations
abs, exp, log, log10, log2, logistic, power, power, sign, sqrt
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Methods inherited from interface org.ujmp.core.booleanmatrix.calculation.BooleanCalculations
and, and, eq, eq, ge, ge, gt, gt, le, le, lt, lt, ne, ne, not, or, or, xor, xor
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Methods inherited from interface org.ujmp.core.interfaces.Conversions
toBigDecimalMatrix, toBigIntegerMatrix, toBooleanMatrix, toByteMatrix, toCharMatrix, toDoubleMatrix, toFloatMatrix, toIntMatrix, toListMatrix, toLongMatrix, toMapMatrix, toObjectMatrix, toSetMatrix, toShortMatrix, toStringMatrix
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Methods inherited from interface org.ujmp.core.interfaces.CoordinateFunctions
allCoordinates, availableCoordinates, getCoordinatesOfMaximum, getCoordinatesOfMinimum, nonZeroCoordinates, selectedCoordinates, selectedCoordinates
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Methods inherited from interface org.ujmp.core.interfaces.CoreObject
getCoreObjectId
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.creators.CreatorDoubleCalculations
eye, nans, ones, rand, randn, zeros
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.decomposition.DecompositionDoubleCalculations
chol, eig, eigSymm, ginv, inv, invSPD, invSymm, lu, pinv, pinv, princomp, qr, solve, solveSPD, solveSymm, svd, svd
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.discretize.DiscretizeCalculations
discretize, discretize, discretizeToBoolean, discretizeToColumns
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Methods inherited from interface org.ujmp.core.interfaces.DistanceMeasures
chebyshevDistanceTo, cosineSimilarity, cosineSimilarityTo, euklideanDistance, euklideanDistanceTo, manhattenDistance, manhattenDistanceTo, minkowskiDistance, minkowskiDistanceTo
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Methods inherited from interface org.ujmp.core.interfaces.ExtendedMatrixProperties
bigDecimalValue, bigIntegerValue, booleanValue, byteValue, charValue, containsBigDecimal, containsBigInteger, containsBoolean, containsByte, containsChar, containsDate, containsDouble, containsFloat, containsInt, containsLong, containsMissingValues, containsNull, containsObject, containsShort, containsString, dateValue, det, doubleValue, floatValue, getAbsoluteValueMean, getAbsoluteValueSum, getEuklideanValue, getMaxValue, getMeanValue, getMinValue, getRMS, getStdValue, getValueSum, intValue, isSPD, longValue, norm1, norm2, normF, normInf, pdet, rank, setContent, shortValue, stringValue, trace
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Methods inherited from interface org.ujmp.core.genericmatrix.GenericMatrix2D
getObject, getObject, setObject, setObject
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Methods inherited from interface org.ujmp.core.interfaces.GettersAndSetters
getAsBigDecimal, getAsBigInteger, getAsBoolean, getAsByte, getAsByteArray, getAsChar, getAsDate, getAsDouble, getAsFloat, getAsInt, getAsLong, getAsMatrix, getAsObject, getAsShort, getAsString, getPreferredObject, setAsBigDecimal, setAsBigInteger, setAsBoolean, setAsByte, setAsByteArray, setAsChar, setAsDate, setAsDouble, setAsFloat, setAsInt, setAsLong, setAsMatrix, setAsObject, setAsShort, setAsString, toBigDecimalArray, toBigIntegerArray, toBooleanArray, toByteArray, toCharArray, toDateArray, toDoubleArray, toFloatArray, toIntArray, toLongArray, toObjectArray, toShortArray, toStringArray
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Methods inherited from interface org.ujmp.core.interfaces.HasDescription
getDescription, setDescription
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Methods inherited from interface org.ujmp.core.interfaces.HasGUIObject
getGUIObject, showGUI
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Methods inherited from interface org.ujmp.core.interfaces.HasLabel
getLabel, getLabelObject, setLabel
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Methods inherited from interface org.ujmp.core.annotation.HasMetaData
getColumnForLabel, getColumnLabel, getDimensionLabel, getDimensionMetaData, getMetaData, getMetaData, getMetaDataDimensionMatrix, getMetaDataDouble, getMetaDataMatrix, getMetaDataString, getPositionForLabel, getRowForLabel, getRowLabel, setColumnLabel, setDimensionLabel, setDimensionMetaData, setMetaData, setMetaData, setMetaDataDimensionMatrix, setRowLabel
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.hyperbolic.HyperbolicDoubleCalculations
cosh, sinh, tanh, tanh
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Methods inherited from interface org.ujmp.core.Matrix
clone, exportTo, fireValueChanged, fireValueChanged, fireValueChanged, importFrom, save, save, share, share, toHtml
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.misc.MiscEntrywiseDoubleCalculations
grayScale
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.misc.MiscGeneralDoubleCalculations
append, appendHorizontally, appendVertically, center, fadeIn, fadeOut, normalize, replaceMissingBy, standardize
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.missingvalues.MissingValueDoubleCalculations
addMissing, countMissing, deleteColumnsWithMissingValues, deleteRowsWithMissingValues, impute
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Methods inherited from interface org.ujmp.core.objectmatrix.calculation.ObjectCalculations
bootstrap, bootstrap, convert, delete, delete, delete, deleteColumns, deleteColumns, deleteRows, deleteRows, diag, extractAnnotation, fill, flipdim, includeAnnotation, replace, reshape, select, select, select, selectColumns, selectColumns, selectRows, selectRows, shuffle, sortrows, squeeze, subMatrix, swap, toColumnVector, toRowVector, transpose, transpose, transpose, tril, triu, unique, uniqueValueCount
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.rounding.RoundingDoubleCalculations
ceil, floor, round
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.general.statistical.StatisticalDoubleCalculations
corrcoef, cov, cumprod, cumsum, diff, indexOfMax, indexOfMin, max, mean, min, mutualInf, pairedTTest, prod, std, sum, var
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Methods inherited from interface org.ujmp.core.stringmatrix.calculation.StringCalculations
convertEncoding, lowerCase, removePunctuation, removeWords, replaceRegex, replaceRegex, stem, tfIdf, translate, upperCase
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Methods inherited from interface org.ujmp.core.treematrix.Tree
getChildren, getObjectList, getParentMap, setRoot
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Methods inherited from interface org.ujmp.core.doublematrix.calculation.entrywise.trigonometric.TrigonometricDoubleCalculations
cos, sin, tan
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Field Detail
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serialVersionUID
private static final long serialVersionUID
- See Also:
- Constant Field Values
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Method Detail
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containsCoordinates
public boolean containsCoordinates(long... coordinates)
Description copied from interface:CoordinateFunctions
Determines if the given Coordinates are part of the Matrix. If the Matrix is dense, true is returned for all Coordinates smaller than the Matrix's size. For sparse Matrices, this function checks if the coordinates are actually stored in the matrix or not.- Specified by:
containsCoordinates
in interfaceCoordinateFunctions
- Parameters:
coordinates
- The coordinates to check- Returns:
- a boolean stating if the coordinates are part of the Matrix
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isChild
public final boolean isChild(java.lang.Object parent, java.lang.Object child)
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isChild
public final boolean isChild(int parentId, int childId)
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getChildCountRecursive
public final long getChildCountRecursive(java.lang.Object parent)
- Specified by:
getChildCountRecursive
in interfaceTree<T>
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addChildren
public void addChildren(T parent, java.util.Collection<? extends T> children)
- Specified by:
addChildren
in interfaceTree<T>
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getSize
public final long[] getSize()
- Specified by:
getSize
in interfaceBaseMatrixProperties
- Overrides:
getSize
in classAbstractMatrix
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getDouble
public final double getDouble(int row, int column)
- Specified by:
getDouble
in interfaceDoubleMatrix2D
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getDouble
public final double getDouble(long row, long column)
- Specified by:
getDouble
in interfaceDoubleMatrix2D
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removeChild
public final void removeChild(T parent, T child)
- Specified by:
removeChild
in interfaceTree<T>
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setDouble
public final void setDouble(double value, long row, long column)
- Specified by:
setDouble
in interfaceDoubleMatrix2D
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setDouble
public void setDouble(double value, int row, int column)
- Specified by:
setDouble
in interfaceDoubleMatrix2D
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addTreeModelListener
public void addTreeModelListener(javax.swing.event.TreeModelListener l)
- Specified by:
addTreeModelListener
in interfacejavax.swing.tree.TreeModel
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getChild
public final T getChild(java.lang.Object parent, int index)
- Specified by:
getChild
in interfacejavax.swing.tree.TreeModel
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getChildCount
public final int getChildCount(java.lang.Object parent)
- Specified by:
getChildCount
in interfacejavax.swing.tree.TreeModel
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getIndexOfChild
public final int getIndexOfChild(java.lang.Object parent, java.lang.Object child)
- Specified by:
getIndexOfChild
in interfacejavax.swing.tree.TreeModel
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isLeaf
public final boolean isLeaf(java.lang.Object node)
- Specified by:
isLeaf
in interfacejavax.swing.tree.TreeModel
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removeTreeModelListener
public final void removeTreeModelListener(javax.swing.event.TreeModelListener l)
- Specified by:
removeTreeModelListener
in interfacejavax.swing.tree.TreeModel
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valueForPathChanged
public final void valueForPathChanged(javax.swing.tree.TreePath path, java.lang.Object newValue)
- Specified by:
valueForPathChanged
in interfacejavax.swing.tree.TreeModel
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getNumberOfObjects
public final int getNumberOfObjects()
- Specified by:
getNumberOfObjects
in interfaceTree<T>
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