This directory provides sample input data and an example script to run.
IMPORTANT: The parameter files are provided as a sample only and do not necessarily reflect runs used in published papers.
Directories
- populations: provides population density information
- admin_units: specifies the administration units for each country
- param_files: Provides sample parameter files
Running the sample
The file ./run_sample.py
will build and run a sample for a specified country.
Usage
./run_sample.py <COUNTRY>
For example:
./run_sample.py United_Kingdom
This will:
- Build a copy of the CovidSim executable configured for the appropriate country (in this case the UK)
- Do a no intervention base run. This run also provides various
*.bin
files for the later run.
- Do a run with controls applied. This is the step to be repeated when doing further tests/runs.
The sample script has more command line options available. See ./run_sample.py --help
for a list.