1 # Running CovidSim in R
5 These are scripts in R that take the data generated by the spatial simulation
6 and summarize it graphically.
10 [Download and install R.](https://cran.r-project.org/). These scripts have been
11 tested for R 3.4.4, but other versions should work as well.
13 You will need the R library sp, but if this is missing, the scripts will prompt
14 you to install it themselves.
16 ## Running the scripts
18 If you generated data with `run_UK_100th.sh`, you can type
21 Rscript Rscripts/CompareScenarios.R
27 Rscript Rscripts/PlotsSpatial.R
30 More generally, the syntax is:
33 Rscript [path-to-one-of-the-scripts.R] [folder-where-the-data-is]
36 If the second argument is omitted, it will try to pull the data from the